Automatically assigned DDC number: 57280285

Manually assigned DDC number: 57280285

Number of references: 8

Title: Computational Genefinding

Author:

Subject: David Haussler Computational Genefinding

Description: Introduction Computational methodology for finding genes and other functional sites in genomic DNA has evolved significantly over the last 20 years. Excellent recent surveys have been given by Guig'o [10], Claverie [3], Krogh [14] and others. Among the types of functional sites in genomic DNA that researchers have sought to recognize are splice sites, start and stop codons, branch points, promoters and terminators of transcription, polyadenylation sites, ribosomal binding sites, topoisomerase II binding sites, topoisomerase I cleavage sites, and various transcription factor binding sites [8]. Local sites such as these are called signals and methods for detecting them may be called signal sensors. Genomic DNA signals can be contrasted with extended and variable length regions such as exons and introns, which are recognized by different methods that may be called content sensors [26]. 2 Signal Sensors The most bas

Contributor: The Pennsylvania State University CiteSeer Archives

Publisher: unknown

Date: 1998-08-16

Pubyear: 1998

Format: ps

Identifier: http://citeseer.ist.psu.edu/162765.html

Source: http://www.cse.ucsc.edu/~haussler/shortgrpaper.ps

Language: en

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Rights: unrestricted

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